ssvFeatureBars {seqsetvis}R Documentation

bar plots of set sizes

Description

bar plots of set sizes

Usage

ssvFeatureBars(
  object,
  show_counts = TRUE,
  bar_colors = NULL,
  counts_text_colors = NULL,
  return_data = FALSE
)

Arguments

object

passed to ssvMakeMembTable for conversion to membership table

show_counts

logical. should counts be displayed at the center of each bar. default is TRUE

bar_colors

character. rcolor or hex colors. default of NULL uses RColorBrewer Dark2. Will repeat to match number of samples.

counts_text_colors

character. rcolor or hex colors. default of NULL uses RColorBrewer Dark2. Will repeat to match number of samples.

return_data

logical. If TRUE, return value is no longer ggplot and is instead the data used to generate that plot. Default is FALSE.

Value

ggplot of bar plot of set sizes

Examples

ssvFeatureBars(list(1:3, 2:6))
ssvFeatureBars(CTCF_in_10a_overlaps_gr)
ssvFeatureBars(S4Vectors::mcols(CTCF_in_10a_overlaps_gr)[,2:3])

[Package seqsetvis version 1.13.10 Index]