read_segements_file {segmenter}R Documentation

Read segments files

Description

The segments files are the output of running learn_model and named <cell>_3_segment.bed

Usage

read_segements_file(file, states)

Arguments

file

A string. The path to the file.

states

A character vector. The names of the states.

Value

A data.frame

Examples

# locate the file
segmentfile <- file.path(tempdir(), 'GM12878_3_segments.bed')

# read the file
segs <- read_segements_file(segmentfile)
head(segs)


[Package segmenter version 0.99.14 Index]