computeSumFactors {scran} | R Documentation |
Scaling normalization of single-cell RNA-seq data by deconvolving size factors from cell pools. These functions have been moved to the scuttle package and are just retained here for compatibility.
computeSumFactors(...) calculateSumFactors(...)
... |
Further arguments to pass to |
For calculateSumFactors
, a numeric vector of size factors returned by pooledSizeFactors
.
For computeSumFactors
, a SingleCellExperiment containing the size factors in its sizeFactors
,
as returned by computePooledFactors
.
Aaron Lun