caret_model {scAnnotatR} | R Documentation |
Returns the caret model of the scAnnotatR
object
caret_model(classifier)
classifier |
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Classifier is the object returned by caret SVM learning process. More information about the caret package: https://topepo.github.io/caret/
data("tirosh_mel80_example") selected_marker_genes_B = c("CD19", "MS4A1", "CD79A") set.seed(123) classifier_b <- train_classifier(train_obj = tirosh_mel80_example, assay = 'RNA', slot = 'counts', marker_genes = selected_marker_genes_B, cell_type = "B cells", tag_slot = 'active.ident') caret_model(classifier_b)