annotation_ext {recount3} | R Documentation |
Given an organism
and an annotation
, this function returns the
corresponding file extension used in the recount3
files.
annotation_ext( organism = c("human", "mouse"), annotation = annotation_options(organism) )
organism |
A |
annotation |
A |
A character(1)
with the annotation file extension to be used.
Other internal functions for accessing the recount3 data:
create_rse_manual()
,
file_retrieve()
,
locate_url_ann()
,
locate_url()
,
project_homes()
,
read_counts()
,
read_metadata()
annotation_ext("human") annotation_ext("human", "fantom6_cat") annotation_ext("human", "refseq") annotation_ext("mouse")