track_vlines {rGenomeTracks} | R Documentation |
track_vlines()
overlay vertical lines over the whole plot. The only parameter to be passed is a bed file.
track_vlines(file)
file |
String. The location of the track file |
genome_track
Omar Elashkar
tads_dir <- system.file("extdata", "tad_classification.bed", package = "rGenomeTracks" ) genes_dir <- system.file("extdata", "dm3_genes.bed.gz", package = "rGenomeTracks" ) links_dir <- system.file("extdata", "test.arcs", package = "rGenomeTracks" ) tads <- track_domains(tads_dir, color = "#cccccc", border_color = "red") links_overlay <- track_links(links_dir, color = "red", line_width = 3, links_type = "loop", overlay_previous = "share-y" ) links <- track_links(links_dir, color = "blue", line_width = 3, height = 3 ) genes <- track_bed(genes_dir, height = 7, style = "flybase", fontsize = 10 ) vlines <- track_vlines(genes_dir) ## Not run: plot_gtracks(tads + links_overlay + links + genes + vlines, chr = "X", start = 30 * 10^5, end = 35 * 10^5) ## End(Not run)