per_read_quality {qckitfastq}R Documentation

Compute the mean quality score per read. per_read_quality

Description

Compute the mean quality score per read. per_read_quality

Usage

per_read_quality(infile, output_file = NA)

Arguments

infile

Path to FASTQ file

output_file

File to write plot to. Will not write to file if NA. Default NA.

Value

Data frame of mean quality score per read

Examples

infile <- system.file("extdata", "10^5_reads_test.fq.gz", package = "qckitfastq")
prq <- per_read_quality(infile)


[Package qckitfastq version 1.9.0 Index]