gprofiler_orgs {orthogene} | R Documentation |
Organism for which gene references are available via gProfiler API.
Used as a backup if API is not available.
gprofiler_orgs
data.frame
URL <- 'https://biit.cs.ut.ee/gprofiler/api/util/organisms_list'
gprofiler_orgs <- jsonlite::fromJSON(URL)
gprofiler_orgs <- dplyr::arrange(gprofiler_orgs, scientific_name)
usethis::use_data(gprofiler_orgs, overwrite = TRUE, internal=TRUE)