summary-methods {npGSEA} | R Documentation |
show
in Package base ~~~~ Methods for function show
in package base ~~
signature(x = "npGSEAResultNorm")
,signature(x = "npGSEAResultBeta")
,
signature(x = "npGSEAResultChiSq")
These methods display the corresponding statistics (linear or quadratic)for the npGSEA analysis in the gene set in the given experiment.
Jessica L. Larson
set.seed(15) yFactor <- as.factor( c(rep("treated", 5), rep("control", 5)) ) xData <- matrix(data=rnorm(length(letters)*10) ,nrow=length(letters), ncol=10) rownames(xData) <- letters geneSetABC15 <- GeneSet(geneIds=letters[1:15], setName="setABC15") res <- npGSEA(x = xData, y = yFactor, set = geneSetABC15) res