makeInternalBNDatabase {nanotatoR} | R Documentation |
Merges Solo SV files to one common SV file
makeInternalBNDatabase( path, pattern, outpath, fname, dbOutput = c("dataframe", "text") )
path |
character. Path to the solo files. |
pattern |
character. file name pattern for solo files. |
outpath |
character. file path for the output file. |
fname |
character. file name for the output file. |
dbOutput |
character. Output option database or text. |
Text file containing all the solo SMAP files.
path <- system.file("extdata", "Bionano_config/", package = "nanotatoR") pattern <- "_hg19.txt" mergedSmap <- makeInternalBNDatabase(path = path, pattern = pattern, dbOutput = "dataframe") mergedSmap[1,]