annotate_transcript_strand {musicatk}R Documentation

Add transcript strand annotation to SBS variants (defined in genes only)

Description

Add transcript strand annotation to SBS variants (defined in genes only)

Usage

annotate_transcript_strand(musica, genome_build, build_table = TRUE)

Arguments

musica

A musica object.

genome_build

Which genome build to use: hg19, hg38, or a custom TxDb object

build_table

Automatically build a table from this annotation

Value

None

Examples

data(musica)
annotate_transcript_strand(musica, 19)

[Package musicatk version 1.3.1 Index]