getDistance {motifStack} | R Documentation |
Calculate distances between two profiles
getDistance(hsp, count1, count2, P1, P2, pseudo)
hsp |
output of traceBack function |
count1, count2 |
motif profile 1 or 2 |
P1, P2 |
background of profile 1 or 2 |
pseudo |
pseudocount |
full distance and aligned distance.