setOrderingFilter {monocle}R Documentation

Marks genes for clustering

Description

The function marks genes that will be used for clustering in subsequent calls to clusterCells. The list of selected genes can be altered at any time.

Usage

setOrderingFilter(cds, ordering_genes)

Arguments

cds

the CellDataSet upon which to perform this operation

ordering_genes

a vector of feature ids (from the CellDataSet's featureData) used for ordering cells

Value

an updated CellDataSet object


[Package monocle version 2.21.1 Index]