plot_rho_delta {monocle} | R Documentation |
Plots the decision map of density clusters .
plot_rho_delta(cds, rho_threshold = NULL, delta_threshold = NULL)
cds |
CellDataSet for the experiment after running clusterCells_Density_Peak |
rho_threshold |
The threshold of local density (rho) used to select the density peaks for plotting |
delta_threshold |
The threshold of local distance (delta) used to select the density peaks for plotting |
## Not run: library(HSMMSingleCell) HSMM <- load_HSMM() plot_rho_delta(HSMM) ## End(Not run)