selectTopMarkers {monocle} | R Documentation |
This is a handy wrapper function around dplyr's top_n function to extract the most specific genes for each cell type. Convenient, for example, for selecting a balanced set of genes to be used in semi-supervised clustering or ordering.
selectTopMarkers(marker_specificities, num_markers = 10)
marker_specificities |
The dataframe of specificity results produced by |
num_markers |
The number of markers that will be shown for each cell type |
A data frame of specificity results