one2OneRnaMiRNA {mirTarRnaSeq} | R Documentation |
This function inputs accept a list of dataframes and returns an obj with two dataframes called FC and p-value. FC with rownames == genes and columns are FC1, 2, 3, ... (with fold-changes) - P-value with rownames == genes and columns are P1, 2, 3, ... (with p-values) both data.frames have the same order dimensions.
one2OneRnaMiRNA( files, gene_colname = "Gene", fc_colname = "FC", pval_colname = "pvalue", pthreshold = NULL )
files |
a list of dataframes either miRNAs or mRNAs from various time points. |
gene_colname |
Default is a vector character of length 1 "Gene" user can alter if they choose This column contains the gene names. |
fc_colname |
Default "FC" is coloumn name for fold changes user can alter if they choose. |
pval_colname |
Default is "pvalue" column name for p-values (in input). |
pthreshold |
P-value threshold. |
Correlation dataframe
x <- one2OneRnaMiRNA(files)