tina {mina}R Documentation

TINA community dissimilarity used in com_dis. Function for 'tina' dissimilarity/distance calculation. Modified from Schmidt et al., 2016.

Description

TINA community dissimilarity used in com_dis. Function for 'tina' dissimilarity/distance calculation. Modified from Schmidt et al., 2016.

Usage

tina(x, ...)

Arguments

x

An matrix for dissimilarity calculation.

...

Additional parameters.

Value

The output 'tina' dissimilarity matrix.

Examples

## Not run: 
asv_norm <- norm_tab(maize_asv2, method = "raref", depth = 1000)
asv_dis <- com_dis(asv_norm, method = "bray")
asv_dis <- com_dis(asv_norm, method = "tina", threads = 8, nblocks = 40)
asv_tina <- tina(asv_norm, cor_method = "spearman", sim_method = "w_ja",
threads = 8, nblocks = 40)

## End(Not run)

[Package mina version 1.1.11 Index]