bs_pm {mina} | R Documentation |
Inferring the network of different group of samples and test significance by permutation.
bs_pm(x, group, ...)
x |
An object of class 'mina' with 'norm' and 'des' defined. |
group |
The column name of descriptive file 'des' for comparison. |
... |
Additional parameters. |
The network bootstrap and permutation result.
maize <- new("mina", tab = maize_asv2, des = maize_des2) maize <- norm_tab(maize, method = "raref") maize <- fit_tabs(maize) maize <- get_rep(maize, top = 5) maize <- bs_pm(maize, group = "Compartment", per = 0.5)