tina {mina} | R Documentation |
com_dis
.
Function for 'tina' dissimilarity/distance calculation. Modified from Schmidt
et al., 2016.TINA community dissimilarity used in com_dis
.
Function for 'tina' dissimilarity/distance calculation. Modified from Schmidt
et al., 2016.
tina(x, ...)
x |
An matrix for dissimilarity calculation. |
... |
Additional parameters. |
The output 'tina' dissimilarity matrix.
## Not run: asv_norm <- norm_tab(maize_asv2, method = "raref", depth = 1000) asv_dis <- com_dis(asv_norm, method = "bray") asv_dis <- com_dis(asv_norm, method = "tina", threads = 8, nblocks = 40) asv_tina <- tina(asv_norm, cor_method = "spearman", sim_method = "w_ja", threads = 8, nblocks = 40) ## End(Not run)