marker_table<- {microbiomeMarker} | R Documentation |
object
This function replace the marker_table
slot of object
with value
.
marker_table(object) <- value
object |
a |
value |
new value to replace the |
a microbiomeMarker
object.
data(enterotypes_arumugam) mm <- run_limma_voom( enterotypes_arumugam, "Enterotype", contrast = c("Enterotype 3", "Enterotype 2"), pvalue_cutoff = 0.1, p_adjust = "fdr" ) mm_marker <- marker_table(mm) mm_marker marker_table(mm) <- mm_marker[1:2, ] marker_table(mm)