readInterGenerationResults {methylInheritance} | R Documentation |
Read and return intergenerational results contained in a
RDS file
Description
Read and return intergenerational results contained in a
RDS file
Usage
readInterGenerationResults(
outputDir,
permutationID,
type = c("sites", "tiles")
)
Arguments
outputDir |
a string of character , the name of the directory
that will contain
the results of the permutation. The name should end with a slash. The
directory should already exists.
|
permutationID |
an integer , the identifiant of the permutation.
When the permutationID = 0 , the results are considered as the
observed results and are saved in a file with the "_observed_results.RDS"
extension. When the permutationID != 0 , the results are
considered as permutation results and are saved in a file with the
"_permutation_permutationID.RDS" extension.
|
type |
One of the "sites" or "tiles" strings. Specifies
the type of differentially methylated elements should be saved.
Default: "sites" .
|
Value
a list
containing the intergenerational results for the
specified permutation.
Author(s)
Astrid Deschenes, Pascal Belleau
Examples
## Get the name of the directory where the file is stored
filesDir <- system.file("extdata", "TEST", package="methylInheritance")
## Read DMS intergenerational results for the observed data
methylInheritance:::readInterGenerationResults(outputDir =
paste0(filesDir, "/"), 0, "sites")
[Package
methylInheritance version 1.17.0
Index]