splicingDistribution {maser} | R Documentation |
Proportion of events by splicing type.
splicingDistribution(events, fdr = 0.05, deltaPSI = 0.1)
events |
a maser object. |
fdr |
numeric, FDR (False Discovery Rate) cutoff. |
deltaPSI |
numeric, absolute minimum PSI (Percent spliced-in) change |
a ggplot object.
path <- system.file("extdata", file.path("MATS_output"), package = "maser") hypoxia <- maser(path, c("Hypoxia 0h", "Hypoxia 24h")) hypoxia_filt <- filterByCoverage(hypoxia, avg_reads = 5) splicingDistribution(hypoxia_filt)