CircosBackground {interacCircos}R Documentation

BACKGROUND module

Description

Background for better display of other modules

Usage

CircosBackground(
  modulename,
  compareGroup = 1,
  fillColors = "#EEEEFF",
  borderColors = "#000000",
  axisShow = FALSE,
  axisColor = "#000",
  axisOpacity = 0.5,
  axisNum = 4,
  axisWidth = 0.3,
  maxRadius = 190,
  minRadius = 105,
  borderSize = 0.3,
  animationDisplay = FALSE,
  animationTime = 2000,
  animationDelay = 20,
  animationType = "bounce",
  ...
)

Arguments

modulename

The name of the new module

compareGroup

The group number of this module in compare module

fillColors

The filling color of the module

borderColors

The border color of the module

axisShow

Whether show a axis or not

axisWidth, axisColor, axisOpacity, axisNum

The color, opacity value and number of line for axis

minRadius, maxRadius

The outer and inner ring range of module

borderSize

The thickness of the border

animationDisplay

Whether display animation or not

animationTime, animationDelay, animationType

The time, delay and display type for animation

...

Ignored

Value

The module tracks for background modules.

Examples

Circos(CircosBackground('bg01', fillColors="#FFEEEE", borderSize = 1))


[Package interacCircos version 1.3.0 Index]