ibh {ibh} | R Documentation |
This function calculates interaction based homogeneity of the given gene list according to the interaction list
ibh(interactionList, geneList)
interactionList |
List containing the interactions. For each gene/protein, the is an entry in the list with "name" containing name of the gen/protein and "interactors" containing the list of genes/proteins interacting with it. |
geneList |
List of genes/proteins for which interaction based homogeneity is evaluated. |
Interaction based homogeneity value as float
Kircicegi Korkmaz
require(simpIntLists) data(ArabidopsisBioGRIDInteractionEntrezId) geneList <- list(839226,817241, 824340, 832179, 818561, 831145, 838782, 826404); ibh(ArabidopsisBioGRIDInteractionEntrezId,geneList);