ibhForMultipleGeneLists {ibh}R Documentation

Calculate interaction based homogeneity for multiple gene lists according to the interaction list

Description

This function calculated interactios based homogeneity for multiple gene lists according to the interaction list

Usage

ibhForMultipleGeneLists(interactionList, listofGeneList)

Arguments

interactionList

List containing the interactions. For each gene/protein, the is an entry in the list with "name" containing name of the gen/protein and "interactors" containing the list of genes/proteins interacting with it.

listofGeneList

List of list of genes/proteins for which interaction based homogeneity is evaluated.

Value

A vector of floats representing interaction based homogeneity for each list

Author(s)

Kircicegi Korkmaz

See Also

ibh

Examples

	require(simpIntLists)
	data(ArabidopsisBioGRIDInteractionEntrezId)
	listofGeneList <- list(list(839226,817241, 824340, 832179, 818561, 
					831145, 838782, 826404), 
                        list( 832018, 839226, 839226, 838824));
	ibhForMultipleGeneLists(
			ArabidopsisBioGRIDInteractionEntrezId, listofGeneList)


[Package ibh version 1.41.0 Index]