fsrnbr {iCOBRA} | R Documentation |
fsrnbr
slotAccessor and replacement functions for the fsrnbr
slot in a
COBRAPerformance
or COBRAPlot
object.
fsrnbr(x, ...) fsrnbr(x, ...) <- value ## S4 method for signature 'COBRAPerformance' fsrnbr(x) ## S4 replacement method for signature 'COBRAPerformance,data.frame' fsrnbr(x) <- value ## S4 replacement method for signature 'COBRAPlot,data.frame' fsrnbr(x) <- value
x |
A |
... |
Additional arguments. |
value |
A data frame giving information about the observed FSR and the number of features called positive for each method and each stratification level, at various s-value thresholds. If the object does not have an fsrnbr slot (older versions of the class did not have this slot), an empty data frame is returned for simplicity. |
The accessor function returns a data frame giving information about the observed FSR and the number of features called positive for each method and each stratification level, at various s-value thresholds.
Charlotte Soneson
cobradata <- cobradata_example_sval cobraperf <- calculate_performance(cobradata, cont_truth = "logFC", aspects = "fsrnbr") head(fsrnbr(cobraperf))