rctbl_mhyp {hypeR} | R Documentation |
Reactable table for multihyp objects
rctbl_mhyp( mhyp, show_emaps = FALSE, show_hmaps = FALSE, hyp_emap_args = list(top = 25, val = "fdr"), hyp_hmap_args = list(top = 25, val = "fdr") )
mhyp |
A multihyp object |
show_emaps |
Option to show enrichment maps in tabs |
show_hmaps |
Option to show hiearchy maps in tabs |
hyp_emap_args |
A list of keyword arguments passed to hyp_emap |
hyp_hmap_args |
A list of keyword arguments passed to hyp_hmap |
genesets <- msigdb_gsets("Homo sapiens", "C2", "CP:KEGG")$genesets[1:5] experiment <- list("S1"=c("IDH3B","DLST","PCK2","CS","PDHB","PCK1","PDHA1","LOC642502"), "S2"=c("PDHA2","LOC283398","FH","SDHD","OGDH","SDHB","IDH3A","SDHC")) mhyp_obj <- hypeR(experiment, genesets, background=2522) rctbl_mhyp(mhyp_obj)