sites {hiAnnotator} | R Documentation |
A sample dataset containing collection of unique HIV & MLV integration sites in the human genome mapped to UCSC freeze hg18 from PMID: 12805549.
A data frame with 1303 rows and 5 variables
Sequence. Name of the DNA sequence which was aligned to the host genome. This is also a unique ID.
Position. The genomic coordinate of the integration site.
Chr. The chromosome of the integration site.
Ort. The orientation or strand of the integration site.
virus. Name of the virus used for the experiment and a given sequencing clone.
http://www.ncbi.nlm.nih.gov/pubmed/?term=12805549