averagePlot {groHMM} | R Documentation |
Supports parallel processing using mclapply in the 'parallel' package. To change the number of processors, use the argument 'mc.cores'.
averagePlot(ProbeData, Peaks, size = 50, bins = seq(-1000, 1000, size))
ProbeData |
Data.frame representing chromosome, window center, and a value. |
Peaks |
Data.frame representing chromosome, and window center. |
size |
Numeric. The size of the moving window. Default: 50 bp. |
bins |
The bins of the meta gene – i.e. the number of moving windows to break it into. Default +/- 1kb from center. |
A vector representing the 'typical' signal centered on the peaks of interest.
Charles G. Danko and Minho Chae