stringDBhomoSapiens {glmSparseNet}R Documentation

Download protein-protein interactions from STRING DB

Description

Download protein-protein interactions from STRING DB

Usage

stringDBhomoSapiens(version = "11.0", score_threshold = 0, remove.text = TRUE)

Arguments

version

version of the database to use

score_threshold

remove scores below threshold

remove.text

remove text mining-based scores

Value

a data.frame with rows representing an interaction between two proteins, and columns the count of scores above the given score_threshold

Examples


    stringDBhomoSapiens(score_threshold = 800)


[Package glmSparseNet version 1.11.0 Index]