Tx2Gene {getDEE2}R Documentation

Aggregate Transcript Counts to Gene-Level Counts

Description

This function converts Kallisto transcript-level expression estimates to gene-level estimates. Counts for each transcript are summed to get an aggregated gene level score.

Usage

Tx2Gene(x)

Arguments

x

a getDEE2 object.

Value

a dataframe of gene expression counts.

Examples

x <- getDEE2("scerevisiae",c("SRR1755149","SRR1755150"),legacy=TRUE)
x <- Tx2Gene(x)

[Package getDEE2 version 1.3.0 Index]