exportSEA {gep2pep} | R Documentation |
The XLS output includes the full CondSEA or PathSEA results,
together with additional gene set information for the CondSEA. If
the PathSEA or CondSEA analysis was performed with
details=TRUE
, details will be reported in the XLS file. This
function requires the WriteXLS library.
exportSEA(rp, results, outname = NULL)
rp |
A repository created by |
results |
The output of |
outname |
Name of the XLS file to be created. |
Nothing.
CondSEA, PathSEA
db <- loadSamplePWS() repo_path <- file.path(tempdir(), "gep2pepTemp") rp <- createRepository(repo_path, db) geps <- loadSampleGEP() buildPEPs(rp, geps) pgset <- c("(+)_chelidonine", "(+/_)_catechin") psea <- CondSEA(rp, pgset) ## Not run: exportSEA(rp, psea) ## End(Not run) unlink(repo_path, TRUE)