admixture {genotypeeval}R Documentation

admixture - estimate admixture components using supervised ADMIXTURE algorithm.

Description

admixture - estimate admixture components using supervised ADMIXTURE algorithm.

Usage

admixture(x, vr.ref)

Arguments

x

myvcf of interest

vr.ref

reference file for admixture estimation (uses subset of 1000 Genomes)

Value

List, name of metric (admixture), list of true false values if passed, ancestry coefficient values


[Package genotypeeval version 1.25.0 Index]