getRawBeta {funtooNorm}R Documentation

Computes Beta value from raw signals

Description

Computes Beta value from raw signals

Usage

getRawBeta(object, offset = 100)

## S4 method for signature 'SampleSet'
getRawBeta(object, offset = 100)

Arguments

object

object of class SampleSet

offset

default is 100 as Illumina standard

Value

a matrix containing the raw beta value for each position and each samples

Methods (by class)

Examples

require(minfiData)
pData(RGsetEx)$cell_type <- rep(c("type1","type2"),3)
mySampleSet=fromRGChannelSet(RGsetEx)
r=getRawBeta(mySampleSet)


[Package funtooNorm version 1.17.0 Index]