extractParams {flowTrans} | R Documentation |
Extracts the transformation parameters from a flowTransResult
object
extractParams(x, dims = NULL)
x |
An object of type |
dims |
A character vector specifying the dimensions for which to extract transformation parameters. |
A list of length length(dims)
. Each element contains a vector of parameters for transforming the particular dimension.The names of the list elements correspond to the names of the dimensions.
flowTrans
estimates common transformation parameters.
Greg Finak <greg.finak@ircm.qc.ca>, Raphael Gottardo <raphael.gottardo@ircm.qc.ca>
Finak G, Perez JM, Weng A, Gottardo R. Optimizing Data Transformation for Flow Cytometry. (Submitted)
summary
,
flowTrans
,
flowTransResult
m <- t(matrix(rnorm(10000),2)) colnames(m) <- c("A","B") m <- flowFrame(m) res <- flowTrans(m,"mclMultivBoxCox", c("A","B"), n2f=FALSE, parameters.only=FALSE) summary(res) extractParams(res)