barcode {flowPeaks} | R Documentation |
A flow cytometry data that is used barcode to measure many samples simultaneusly
data(barcode)
An object (barcode) of data frame with 180912 rows and 3 columns and a vector (barcode.cid) for the cluster labels accoring to the manual gating.
The data is a random subset of the full data set for Figure 3A of the paper (Sugar et al 2010), This subset was used to do all comparisons in the paper (Ge et al 2012) with other clustering algorithms.
Sugar I. P. and Sealfon S. C., Misty Mountain clustering:
application to fast unsupervised flow cytometry gating,
BMC Bioinformatcs, 2010, 11:502.
Ge Y. et al, flowPeaks: a fast unsupervised clustering for flow cytometry data via K-means and density peak finding, 2012, Bioinformatics 8(15):2052-8