exons_by_unique_gene {exomePeak2}R Documentation

Extracting exons by the corresponding genes that are on the same chromosomes and strand.

Description

Extracting exons by the corresponding genes that are on the same chromosomes and strand.

Usage

exons_by_unique_gene(txdb)

Arguments

txdb

A TXDB object.

Value

A GRangesList object, each element in it corresponds to GRanges of the merged exons of an unique gene, the name corresponds to the original gene with .integer indexed if they have exons on different strands and chromosomes.

The genes that are overlap between each other are merged into one genes, and the exons are also merged into one if they can overlap with each other.


[Package exomePeak2 version 1.5.0 Index]