easyRNASeq AnnotParam accessors {easyRNASeq} | R Documentation |
These functions and generics define 'accessors' (to get and set values) for
AnnotParam
objects within the easyRNASeq package.
Implemented are:
datasource
type
datasource(object) ## S4 method for signature 'AnnotParam' type(x)
object |
An object derived from class |
x |
An object derived from class |
The value of the corresponding slot.
Nicolas Delhomme
The AnnotParam
class.
The type and organism generics are imported from the BSgenome
and
Biostrings
package, respectively.
# fetch the example data Dm.annot <- fetchData("Dmel-mRNA-exon-r5.52.gff3.gz") annot <- AnnotParam(datasource=Dm.annot) # get the datasource Parameter datasource(annot)