plotPvals {cpvSNP}R Documentation

Create a Plot of P-Values Against Number of SNPs per Set for All Sets in a Collection

Description

Plots association test p-values against number of SNPs per gene set.

Usage

plotPvals(set, title = "", xlab = "SNPs per Gene Set", ylab = "PValue",
  ...)

Arguments

set

An object of class GeneSetResultCollection.

title

A character string containing the title of the plot. Default is "", a blank title.

xlab

A character vector with the label for the x-axis on the plot. Default is SNPs per Gene Set.

ylab

A character vector holding the label for the y-axis on the plot. Default is PValue.

...

Further arguments to be passed to the plotting methods, such as graphical parameters.

Details

Creates a plot of all p-values against the number of SNPs in the gene set, for all sets within a collection.

Value

Creates a plot.

Author(s)

Caitlin McHugh mchughc@uw.edu


[Package cpvSNP version 1.25.0 Index]