toy_signaling_input {cosmosR} | R Documentation |
This signaling data are a subset of the footprint-based signaling activity estimates of transcription factors, kinases and phophatases used as an input in the case study of the COSMOS paper. The subset contains a random selection of signaling proteins present in the toy network.
data(toy_signaling_input)
An object of class “data.frame
” containing the normalised
enrichment scores (NES) of 2 signaling proteins, which are named with their
respective gene Entrez ID matching the toy network.
Subset of: https://github.com/saezlab/COSMOS_MSB/blob/main/data/signaling_input_COSMOS.csv
Dugourd, A., Kuppe, C. and Sciacovelli, M. et. al. (2021) Molecular Systems Biology. 17, e9730.
data(toy_signaling_input)