ref_feature_select {clustifyr} | R Documentation |
feature select from reference matrix
ref_feature_select(mat, n = 3000, mode = "var", rm.lowvar = TRUE)
mat |
reference matrix |
n |
number of genes to return |
mode |
the method of selecting features |
rm.lowvar |
whether to remove lower variation genes first |
vector of genes
pbmc_avg <- average_clusters( mat = pbmc_matrix_small, metadata = pbmc_meta, cluster_col = "classified" ) ref_feature_select( mat = pbmc_avg[1:100, ], n = 5 )