importOther {circRNAprofiler} | R Documentation |
The function importOther() is designed to read output file from a annotation-based circRNA detection tool. The user after the detection of the crcRNAs must format the output file, so that it has the following columns with header: gene, strand, chrom, startUpBSE, endDownBSE and coverage. If more columns are present they will be discared.
importOther(pathToFile)
pathToFile |
A character string specifying the path to the file containing the detected circRNAs. |
A data frame.
# Path to an example file containing circRNAs pathToFile <- system.file("extdata", "other/circRNAs_001.txt", package="circRNAprofiler") # Inner function. # Import circRNAs importOther(pathToFile)