get_fusion_by_chromosome {chimeraviz} | R Documentation |
Helper function to retrieve the Fusion objects that involves genes in the given chromosome name.
get_fusion_by_chromosome(fusion_list, chr)
fusion_list |
A list of Fusion objects. |
chr |
The chromosome name we're looking for fusions in. |
A list of Fusion objects.
defuse833ke <- system.file( "extdata", "defuse_833ke_results.filtered.tsv", package="chimeraviz") fusions <- import_defuse(defuse833ke, "hg19", 1) length(get_fusion_by_chromosome(fusions, "chr1")) # [1] 1