rmPreProcessing {cellmigRation} | R Documentation |
This function allows preprocessing of the trajectory data from random migration (RM) experiments.
rmPreProcessing( object, PixelSize = 1.24, TimeInterval = 10, FrameN = NULL, ExpName = NULL )
object |
|
PixelSize |
A numeric value of the physical size of a pixel. Default is 1.24. |
TimeInterval |
A numeric value of the time elapsed between successive frames in the time-lapse stack. Default is 10 min. |
FrameN |
A numeric value of the number of frames. Default is NULL |
ExpName |
string, name of the experiment. Can be NULL |
An CellMig class object with preprocessed data.
Salim Ghannoum salim.ghannoum@medisin.uio.no
https://www.data-pulse.com/dev_site/cellmigration/
TrajectoryDataset <- get(data(TrajectoryDataset)) rmDF=TrajectoryDataset[seq(1,40,by=1),] rmTD <- CellMig(rmDF) rmTD <- rmPreProcessing(rmTD, FrameN=30)