normalise_by_factor {cellity}R Documentation

Internal function to normalize by library size

Description

Internal function to normalize by library size

Usage

normalise_by_factor(counts, norm_factor)

Arguments

counts

matrix of counts

norm_factor

vector of normalisation factors

Value

a matrix with normalized gene counts

Examples

data(sample_counts)
data(sample_stats)
sample_counts_nm <- normalise_by_factor(sample_counts, colSums(sample_counts))

[Package cellity version 1.21.0 Index]