update_nodes {ceRNAnetsim} | R Documentation |
This function carries variables from edge to node and should be used after 'update_how' or 'update_variables' functions
update_nodes(input_graph, once = FALSE, limit = 0)
input_graph |
Processed graph object in previous step. |
once |
The argument is about when the carrying process runs (internal use only) |
limit |
absolute minimum amount of change required to be considered as up/down regulated element |
If the carrying process performs after priming_graph function, the argument must be TRUE. The function helps to visualisation of processed graph object, especially that includes too many nodes.This step makes it easily to follow the processes.
the graph object.
data('minsamp') minsamp %>% priming_graph(Competing_expression, miRNA_expression) %>% update_how('Gene2',2)