plotBioMatrix {caOmicsV} | R Documentation |
A sample way to plot sample information and genomic data with default settings.
plotBioMatrix(dataSet, summaryType=c("text", "bar"), summarybyRow=TRUE, heatmapMax=NULL, heatmapMin=NULL, heatmapColor="BlueWhiteRed")
dataSet |
an object, returned from method of getPlotDataSet(), with all plot data |
summaryType |
character vector, either "text" or "bar", for plot type of summary data |
summarybyRow |
logic, if the summary data is for each row or for each column |
heatmapMax |
numeric, maximum value for heatmap plot, set to NULL to use the maximum value in input data. |
heatmapMin |
numeric, minimum value for heatmap plot, set to NULL to use the minimum value in input data. |
heatmapColor |
character vector,one of "BlueWhiteRed", "GreenWhiteRed", "GreenYellowRed", "GreenBlackRed" , or "YellowToRed" |
None
Henry Zhang
data(biomatrixPlotDemoData) plotBioMatrix(biomatrixPlotDemoData, summaryType="text", summarybyRow=TRUE, heatmapMax=3, heatmapMin=-3, heatmapColor="BlueWhiteRed")