BiocycPathwayGenes {brendaDb} | R Documentation |
Get all genes involved in a BioCyc pathway.
BiocycPathwayGenes(org.id = "HUMAN", pathway)
org.id |
The identifier for the organism database in BioCyc, e.g. ECOLI, HUMAN, META, AFER243159 |
pathway |
A case-sensitive pathway object identifier, e.g. PWY66-400, LYSINE-DEG1-PWY. |
If the pathway is found, returns a tibble with columns BiocycGene
,
BiocycProtein
, Symbol
and Ensembl
, where BiocycGene
and
BiocycProtein
are the gene and protein IDs in the BioCyc database,
respectively. Returns NULL if the pathway ID is not found.
BiocycPathwayGenes("HUMAN", "PWY66-400") BiocycPathwayGenes("HUMAN", "TRYPTOPHAN-DEGRADATION-1")