aggregateAndPreprocess {blima}R Documentation

Aggregate data

Description

This function is not intended to direct use. It helps perform work of doProbeTTests function. For each probe it prints mean and sd of an quality.

Usage

aggregateAndPreprocess(x, quality = "qua", transformation = NULL)

Arguments

x

Two column matrix to agregate with columns "ProbeID" and quality.

quality

Quality to analyze, default is "qua".

transformation

Function of input data trasformation, default is NULL. Any function which for input value returns transformed value may be supplied. T-test then will be evaluated on transformed data, consider use log2TranformPositive.

Value

Some return value

Author(s)

Vojtěch Kulvait


[Package blima version 1.27.0 Index]