checkDimensions {bioCancer}R Documentation

Chech wich Cases and genetic profiles are available for every seleted study

Description

Chech wich Cases and genetic profiles are available for every seleted study

Usage

checkDimensions(panel,StudyID)

Arguments

panel

panel can take to strings 'Circomics' or 'Networking'

StudyID

Study reference using cgdsr index

Value

A data frame with two column (Cases, Genetic profiles). Every row has a dimension (CNA, mRNA...). The data frame is filled with yes/no response.

Examples

cgds <- CGDS("http://www.cbioportal.org/")
## Not run: 
df <- checkDimensions(panel='Networking', StudyID= "gbm_tcga_pub")

## End(Not run)

[Package bioCancer version 1.21.02 Index]