get_top_clones {barcodetrackR} | R Documentation |
Retrieves the sequence(s) (row-identifier(s)) of the top "n_clones" within the specified sample from a SummarizedExperiment object.
get_top_clones(your_SE, SAMPLENAME_choice, n_clones = 10)
your_SE |
A summarized experiment. |
SAMPLENAME_choice |
Name of the SAMPLENAME identifier within your_SE from which to retrieve the top clones from. |
n_clones |
Numeric. Number of top clones from the specified sample that should be retrieved. |
The row indices for the top n_clones in the dataset, using the 'ranks' assay.
data(wu_subset) get_top_clones(wu_subset, "ZJ31_6m_T", n_clones = 10)