plot_data {autonomics} | R Documentation |
Plot data
plot_data( data, geom = geom_point, color = NULL, fill = !!enquo(color), ..., fixed = list(), theme = list() )
data |
data.frame' |
geom |
geom_point, etc. |
color |
variable mapped to color (symbol) |
fill |
variable mapped to fill (symbol) |
... |
mapped aesthetics |
fixed |
fixed aesthetics (list) |
theme |
list with ggplot theme specifications |
ggplot object
Aditya Bhagwat, Johannes Graumann
require(magrittr) file <- download_data('halama18.metabolon.xlsx') object <- read_metabolon(file, plot = FALSE) object %<>% pca() data <- sdata(object) plot_data(data, x = pca1, y = pca2) plot_data(data, x = pca1, y = pca2, color = TIME_POINT) data$TIME <- as.numeric(substr(data$TIME_POINT, 2, 3)) plot_data(data, x = pca1, y = pca2, color = TIME) plot_data(data, x = pca1, y = pca2, color = NULL) fixed <- list(shape = 15, size = 3) plot_data(data, x = pca1, y = pca2, fixed=fixed)