filter_replicated {autonomics}R Documentation

Filter for replicated features

Description

Filter for replicated features

Usage

filter_replicated(object, comparator = `>`, lod = 0, n = 2, verbose = TRUE)

Arguments

object

SummarizedExperiment

comparator

string

lod

number: limit of detection

n

number: number of replicates above lod

verbose

TRUE/FALSE

Value

SummarizedExperiment

Examples

require(magrittr)
file <- download_data('fukuda20.proteingroups.txt')
object <- read_proteingroups(file, plot=FALSE)
object %<>% filter_replicated()

[Package autonomics version 1.1.7 Index]