proteingroups {autonomics}R Documentation

Get/Set proteingroups

Description

Get / Set proteingroups matrix

Usage

proteingroups(object)

## S4 method for signature 'SummarizedExperiment'
proteingroups(object)

proteingroups(object) <- value

## S4 replacement method for signature 'SummarizedExperiment,matrix'
proteingroups(object) <- value

## S4 replacement method for signature 'SummarizedExperiment,numeric'
proteingroups(object) <- value

Arguments

object

SummarizedExperiment

value

occupancy matrix (features x samples)

Value

occpuancy matrix (get) or updated object (set)

Examples

file <- download_data('fukuda20.proteingroups.txt')
object <- read_proteingroups(file, plot=FALSE)
proteingroups(object)[1:3, 1:3]

[Package autonomics version 1.1.7 Index]