sumexp2mae {autonomics} | R Documentation |
Create MultiAssayExperiment from SummarizedExperiment list
sumexp2mae(experiments)
experiments |
named list of SummarizedExperiments |
MultiAssayExperiment
require(magrittr) somascanfile <- download_data('atkin18.somascan.adat') metabolonfile <- download_data('atkin18.metabolon.xlsx') somascan <- read_somascan(somascanfile, plot=FALSE) metabolon<- read_metabolon(metabolonfile, plot=FALSE) svars(somascan) %<>% stringi::stri_replace_first_fixed( 'SampleGroup', 'subgroup') svars(metabolon) %<>% stringi::stri_replace_first_fixed( 'Group', 'subgroup') metabolon$replicate <- NULL object <- sumexp2mae(list(somascan=somascan, metabolon=metabolon))