combineUMI4C {UMI4Cats} | R Documentation |
Combine the UMI4C fragments that overlap a given set of query_regions
.
combineUMI4C(umi4c, query_regions)
umi4c |
UMI4C object as generated by |
query_regions |
|
UMI4C
object with rowRanges corresponding to query_regions and
assay containing the sum of raw UMI counts at each specified query_region
.
data("ex_ciita_umi4c") wins <- makeWindowFragments(ex_ciita_umi4c) umi_comb <- combineUMI4C(ex_ciita_umi4c, wins)