ToxicoSet {ToxicoGx} | R Documentation |
A constructor that simplifies the process of creating ToxicoSets, as well as creates empty objects for data not provided to the constructor. Only objects returned by this constructor are expected to work with the ToxicoSet methods. For a much more detailed instruction on creating ToxicoSets, please see the "CreatingToxicoSet" vignette.
ToxicoSet( name, molecularProfiles = list(), cell = data.frame(), drug = data.frame(), sensitivityInfo = data.frame(), sensitivityRaw = array(dim = c(0, 0, 0)), sensitivityProfiles = matrix(), sensitivityN = matrix(nrow = 0, ncol = 0), perturbationN = array(NA, dim = c(0, 0, 0)), curationDrug = data.frame(), curationCell = data.frame(), curationTissue = data.frame(), datasetType = c("sensitivity", "perturbation", "both"), verify = TRUE )
name |
A |
molecularProfiles |
A |
cell |
A |
drug |
A |
sensitivityInfo |
A |
sensitivityRaw |
A 3 Dimensional |
sensitivityProfiles |
|
sensitivityN, perturbationN |
A |
curationCell, curationDrug, curationTissue |
A |
datasetType |
A |
verify |
|
An object of class ToxicoSet