get_rslocs_38 {TFutils} | R Documentation |
utility to obtain location etc. for rsids of SNPs
get_rslocs_38(rsids = c("rs6060535", "rs56116432"))
rsids |
character vector of dbSNP identifiers |
GRanges instance
Uses rest.ensembl.org, posting to variant_recorder/homo_sapiens. Parses result minimally, using only the first SPDI to obtain location information, adding 1 as ensembl genomic coordinates are zero-based.
if (interactive()) get_rslocs_38() # see https://stat.ethz.ch/pipermail/bioc-devel/2020-October/017263.html